Seurat DimPlot enhancement II — DimPlotPlus • pochi

Seurat DimPlot enhancement II

Usage

DimPlotPlus(
  object,
  reduction = "umap",
  shape.choice = 21,
  pt.size = 1.75,
  st.size = 0.25,
  ...
)

Arguments

object: Seurat object
reduction: Which reduction to use in the DimPlot
shape.choice: Which shape to use for the points int he DimPlot
pt.size: Size of DimPlot points
st.size: Size of DimPlot stencil around points
...: Other arguments to Seurat::DimPlot

Value

Returns a DimPlot

Details

Identical to DimPlot with the exception that points are drawn as fill-able circles with a black border.